Insertion junction: CLIP2.005438_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005438
Chromosome:chromosome 12
Location:3570236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGGTCCCGCGGCGGCGGCCATGGCGGCGGTGGCAGCGGCGGCTGGCC
Internal bar code:CTGCTTACAGCGGGTTCAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAACAGAAGGAGTCCG
Suggested primer 2:CCTGCCATCTGGTCTCCATC