Insertion junction: CLIP2.005446_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005446
Chromosome:chromosome 7
Location:5109490
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g348100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCTACCCCACATCCGCAAATCACAACGCAATCGCCTCCCCCCACTCT
Internal bar code:AAGTTTGGCTAGTCCAGAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACACTCTTGCG
Suggested primer 2:AATAAGCACTCGGGGGTTGG