Insertion junction: CLIP2.005452_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005452
Chromosome:chromosome 16
Location:5964025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678851 SBP2,PSBP2 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407//PTHR31407:SF3 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCAAGCATTCGCTACAGTTTAATTTATTACATATGTAAAGTGACGAA
Internal bar code:GGAGCGAGAGGTAGGCCGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGCCATGGACACCACAT
Suggested primer 2:TGGCTGAGAAAGGGAAGCTG