Insertion junction: CLIP2.005459_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005459
Chromosome:chromosome 3
Location:2554622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAGAGCCGCAGCCGGAGCCGGGATCGGCGCCAAGAGCCGGCCGGCCG
Internal bar code:CGATAATCCTCTACTTTAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTTACACAGAGACCACC
Suggested primer 2:ACCCAACAACCCAAGCAGAA