Insertion junction: CLIP2.005461_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005461
Chromosome:chromosome 2
Location:2982155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGTTGGCCGAAATGTTGTCCAGGACTTGCCTGCCGACAAAGCCGACC
Internal bar code:GCTTTTGAACTCGGGAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:87.8049
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACACAACCCTCCTCTC
Suggested primer 2:TCAATCGCAACGTGTGGGTA