Insertion junction: CLIP2.005461_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005461
Chromosome:chromosome 6
Location:3463637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGACTCACCTGTCGCACATCCGCCTCGACCTGCACGCCGCTTCCCTCG
Internal bar code:ATCAGGAGCGCTTCATCTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1975
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTCTTGTCAGGACTGG
Suggested primer 2:GTCCAAGCTACCCCAACCTC