Insertion junction: CLIP2.005464_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005464
Chromosome:chromosome 12
Location:1439844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488350 (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAACTGCGGGTGACAAACGTGTGCGAGGTCAAACGTGAACCACACCA
Internal bar code:TACGCGCCTCAGCGAATTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5169
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAAGTGCCAGCGAAACG
Suggested primer 2:TGACTCAATCAAACGCCGGA