Insertion junction: CLIP2.005466_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005466
Chromosome:chromosome 5
Location:79041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242000 CHLD,CHLD1 (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD); Magnesium chelatase subunit D, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGGACGCCGGTCGACTGCCTGCAGGTGCGCATCGGCTATGCTATCCG
Internal bar code:CACTGATACAAATTATCGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5840
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCCAACCCCCATTAGTC
Suggested primer 2:GCTACTAGGTGCCGAGTGAC