Insertion junction: CLIP2.005470_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005470
Chromosome:chromosome 12
Location:9194047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543303 CGLD20,CGLD6 conserved protein with COG5222 RING zinc finger domain; (1 of 1) PF08783 - DWNN domain (DWNN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCCCCAGCCTGCTGCGATGCCGCCTGACCGCGCCGCTCCCCGGCACT
Internal bar code:AAAAAGAGACACCAGAACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4805
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGTACTCCAAAGGGAAC
Suggested primer 2:AAGCCCTCCAAACAGATCGG