Insertion junction: CLIP2.005471_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005471
Chromosome:chromosome 12
Location:9430008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541211 putative protein kinase; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTACGCACATCACGCCCGGGCTGAGCTAGGCAGCAAGCAGCAGCAC
Internal bar code:GCCATTAAAGAGGCGTACCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:997
LEAP-Seq percent confirming:13.7931
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGGGCGGCTTAATCG
Suggested primer 2:TTCGCTCGGTGGTCGTTTAA