Insertion junction: CLIP2.005471_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005471
Chromosome:chromosome 12
Location:9430023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541211 putative protein kinase; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCACATAAGGAAGTAGGTTCGAGTCGTGAGCATGGCCCAGACAAGC
Internal bar code:GCCATTAAAGAGGCGTACCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2244
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTCGGTGGTCGTTTAA
Suggested primer 2:CAACATGGGCGGCTTAATCG