Insertion junction: CLIP2.005478_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005478
Chromosome:chromosome 14
Location:896946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCGCTTCGGAGGGTGCGATATTGATGGAGGACATCATGGCGCAG
Internal bar code:TGTAACAGTCTAGTACGATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:751
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TACGACCATTAGCGGAGGGA
Suggested primer 2:AAAGACACAGCCGCTGTACA