Insertion junction: CLIP2.005479_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005479
Chromosome:chromosome 1
Location:5127343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035850 SEC24B (1 of 1) PTHR13803//PTHR13803:SF4 - SEC24-RELATED PROTEIN // SEC24; COP-II coat subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTGTGTGGGGGTCACCGACGGTTAATGGCAGGCTGGGATGGGTAAGA
Internal bar code:CCCTCTATGAATGATTCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAACTGTACGCAGGAAGC
Suggested primer 2:GGCATGCCTATCATCCCTCC