Insertion junction: CLIP2.005487_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005487
Chromosome:chromosome 16
Location:5532877
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g682100 TDR1 (1 of 1) 1.1.1.206//1.1.1.236 - Tropinone reductase I / Tropinone reductase // Tropinone reductase II / Tropinone reductase; Tropine dehydrogenase/reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGCGGCGATTCGGGCTGGTTGGTCGGACGTGCCTGGTCACCGGTG
Internal bar code:TATGGTACGCATAATCCATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCTCAACACTACCACG
Suggested primer 2:CTGCGTTGTGAGGGTTTGTG