Insertion junction: CLIP2.005488_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005488
Chromosome:chromosome 16
Location:4535791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671500 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGACGGTGGGGGTTGGGGCGAGGGCGCGGGCAGTTCACAAGAGGAG
Internal bar code:GGGTAACACCGTATCTTCTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TAACTCAACCAGCGAGCCAG
Suggested primer 2:CTGCGGCAATCATCAAGCTC