Insertion junction: CLIP2.005490_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005490
Chromosome:chromosome 7
Location:3848110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTCTTGGGCTCGTGCTCTTTGTGAAAGATTACGGTATGCGCGTTCAT
Internal bar code:TTTATAGAAGATTGATCATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCACGCATAGGAGCAT
Suggested primer 2:AATGGGAGTCGCTGTGCATG