Insertion junction: CLIP2.005494_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005494
Chromosome:chromosome 6
Location:4013668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGGGCGCCGGGCCGTACGAAGGCAAGGTGGCGTTCGTGACGGTGGT
Internal bar code:AAGCAGGGTAGACGGCGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4821
LEAP-Seq percent confirming:96.5116
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGCATGATACAAAGGG
Suggested primer 2:TGTGTACGGTGACTGCAGTC