Insertion junction: CLIP2.005496_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005496
Chromosome:chromosome 6
Location:7820505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303300 CYN37 (1 of 1) PTHR11071:SF174 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC; Cyclophilin 37 3'UTR
Cre06.g303350 FAL9 Conserved protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAATGTAGCGGCCCCGAGCGGACGTTCGGACCGGCGTTTTGCTCATC
Internal bar code:GGGGGTGGAGGCGTGTCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAGGAGGGTCGTAATCT
Suggested primer 2:AACCAGTCTAGCCGCAACTC