Insertion junction: CLIP2.005504_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005504
Chromosome:chromosome 2
Location:7297031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391356 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGCTCGTAGCGGCGGCACCGCCGCCGCCGCACGCCGCAGATCTCAT
Internal bar code:TGGGGCGCTTCCAATTGTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1899
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAACATGTCGGCAGCTG
Suggested primer 2:CCCACAGTTGACCCAGGTTT