Insertion junction: CLIP2.005506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005506
Chromosome:chromosome 16
Location:108655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695450 SPL11,UAF4 U2 snRNP auxiliary factor, large subunit; (1 of 1) PTHR23139:SF68 - ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATATGCACCCTGCAAACTGTGAGATATGGGATCTCGTATGAAATAAG
Internal bar code:TGCGCTCAAGCATCAGGAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1701
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAAGACGGAACACCAC
Suggested primer 2:CCTGTAGTCGTAGCGTCCAC