Insertion junction: CLIP2.005509_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005509
Chromosome:chromosome 6
Location:3950821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278199 (1 of 4) 1.13.11.75 - All-trans-8'-apo-beta-carotenal 15,15'-oxygenase / 8'-apo-beta-carotenal 15,15'-oxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGCAGGCTGTCGTAGGCGATCATGTCCAGCACCAGCCGCCGGTGC
Internal bar code:GAAATATTGTTTTTAGTAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1018
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCTCTCTGCTTTCTGC
Suggested primer 2:CGTGTCCATGTCCACCTTCA