Insertion junction: CLIP2.005510_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005510
Chromosome:chromosome 5
Location:114596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242178 (1 of 1) PTHR23344//PTHR23344:SF10 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATACAGCAGCCGCTTTCCGTCAGCCAGCCATGGGCGCGACCGTCCA
Internal bar code:GGCGACATGTCTCAGGATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2055
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAACAGCAGGCAGTCTGT
Suggested primer 2:TTGGGGGACTTGCCAAACTT