Insertion junction: CLIP2.005512_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005512
Chromosome:chromosome 6
Location:2859241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272300 CPLD57 (1 of 1) PTHR23029:SF45 - PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN; Phosphoglycerate mutase family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCCACAGTACTCGGATTCGTCAAGGGCTCTAGCACCGGCACTTAGTG
Internal bar code:TCTTCGGCTAAAGGTTGTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGTCACCCATCTCTTT
Suggested primer 2:TAGGGAAGGCCAGGGTAGTC