Insertion junction: CLIP2.005516_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005516
Chromosome:chromosome 16
Location:3176582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665450 RYR1,FAP48 Ryanodine-inositol 1%252C4%252C5-triphosphate receptor Ca2+ channel; (1 of 1) K04958 - inositol 1,4,5-triphosphate receptor type 1 (ITPR1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGCTGGCGCCGGCCTCGGAAATGTTACATTCCACAGGAACTTCCATG
Internal bar code:ACGTTTATAAGATCGGTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTCCTCGATGCGGATG
Suggested primer 2:ATGGAACCTTTGACGACGCT