Insertion junction: CLIP2.005518_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005518
Chromosome:chromosome 2
Location:5706720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116250 (1 of 1) PTHR28055//PTHR28055:SF1 - FAMILY NOT NAMED // ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 41, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCACATCAATGCCATGGGCCCCGCAGGTGATTGCTGAGCTGAACCTG
Internal bar code:ATATTAATACTAAAATCCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGCGCTCCATGGTTTG
Suggested primer 2:GGTCAAGCAGCGTAAGGACT