Insertion junction: CLIP2.005520_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005520
Chromosome:chromosome 17
Location:771858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701250 FLA12,PF8,CCDC39,FAP59 Flagellar Associated Protein 59; (1 of 1) PTHR18962//PTHR18962:SF0 - FAMILY NOT NAMED // COILED-COIL DOMAIN-CONTAINING PROTEIN 39 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCCCAACGCGCCTGCTATACTACTGTTCCTGGCTGCGCCTTCACT
Internal bar code:GAAGATAACTACTCCGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGGTGTTCCATGGCGTC
Suggested primer 2:CTTGAGAGCGTGTGGACACT