Insertion junction: CLIP2.005524_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005524
Chromosome:chromosome 9
Location:1364741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400312 (1 of 5) IPR001680//IPR011047//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATCATGTGTAGTATCTGTTCTTATAAGCTTAATCGCTTATATGGTTCT
Internal bar code:AGATGTGACTGTAAACTCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3229
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GAGGATGTCTTCGGCGAGAG