Insertion junction: CLIP2.005525_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005525
Chromosome:chromosome 10
Location:392798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420537 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGCCGAGCTCGAGAGGGTGGCAAAGGGCTGCACGCTGGAGGTCCTG
Internal bar code:TGCGGCACGTCATCATCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACGGTAACACGCCAC
Suggested primer 2:TTCGTGGGCTAGCGATCATC