Insertion junction: CLIP2.005531_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005531
Chromosome:chromosome 17
Location:3775922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726750 SHK1,SHKA1,DHAPS1 (1 of 1) 2.5.1.54 - 3-deoxy-7-phosphoheptulonate synthase / Phospho-2-oxo-3-deoxyheptonate aldolase; DHAP synthetase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTATTGCCCGCCCGCTGACAGCGCACATCGGGGGCTAAACAAGACC
Internal bar code:GCTCAGGAAGCATCGACTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1437
LEAP-Seq percent confirming:78.2051
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGGGTGCAGACCAGAC
Suggested primer 2:AGACATCGCCGATGCTTAGG