Insertion junction: CLIP2.005531_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005531
Chromosome:chromosome 17
Location:3775925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726750 SHK1,SHKA1,DHAPS1 (1 of 1) 2.5.1.54 - 3-deoxy-7-phosphoheptulonate synthase / Phospho-2-oxo-3-deoxyheptonate aldolase; DHAP synthetase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAGGCGCATGGGTGGATATGCGCGCGGGGCGCCCTCAGTAGGGGACT
Internal bar code:TTTCACTTAGTCGACTCATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3290
LEAP-Seq percent confirming:70.6897
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATCGCCGATGCTTAGG
Suggested primer 2:TGAATGGGTGCAGACCAGAC