Insertion junction: CLIP2.005533_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005533
Chromosome:chromosome 13
Location:1278834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570851 PSB34 PSII assembly protein; (1 of 1) PTHR35753//PTHR35753:SF1 - FAMILY NOT NAMED // PROLINE-RICH FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACTCGAGCTTGCTGAGCCCCTCAAAGCCAACTCGCCCTGCCCCTGGG
Internal bar code:GTTCACGCGCCAGCGGTACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4462
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGATCGAGCACGCTAG
Suggested primer 2:GTAGGATGCCTTCGCTCCTC