Insertion junction: CLIP2.005544_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005544
Chromosome:chromosome 12
Location:5536718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530600 GLN3 Glutamine synthetase; (1 of 2) PTHR20852:SF57 - GLUTAMINE SYNTHETASE 2 CYTOPLASMIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCGCACATCACCAGCACGTGGGGGGCACCGCGGATGGGGTCGGTCA
Internal bar code:GCAGGGCTCAAAAAATCATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3399
LEAP-Seq percent confirming:85.8974
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTACATCTGGGCGGATGG
Suggested primer 2:CACCGTGCTTGAAGGTGTTG