Insertion junction: CLIP2.005545_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005545
Chromosome:chromosome 1
Location:1971237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010864 (1 of 1) K02836 - peptide chain release factor 2 (prfB); Homolog to bacterial PrfB peptide chain release factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTGACGGGTGCGTGACGGGTGCATATCTGCCACACGACATTTGTCA
Internal bar code:ATACCGGCACTAGGTCACATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTCGGTTTAGTTTCGG
Suggested primer 2:GCGACCTAACACACATCCCA