Insertion junction: CLIP2.005546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005546
Chromosome:chromosome 17
Location:3117911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720550 (1 of 1) PTHR34202:SF1 - UPF0548 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCACTGACCCACCAATTGTGCCGGCGCATATGGCAACAGGTACAAC
Internal bar code:TAGAATGTGTCGCTTAACGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4007
LEAP-Seq percent confirming:96.6887
LEAP-Seq n confirming:292
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:302

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCACCGCAATTCATGGC
Suggested primer 2:TCGTAGGGAAGACCAGGGAG