Insertion junction: CLIP2.005546_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005546
Chromosome:chromosome 17
Location:3117915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720550 (1 of 1) PTHR34202:SF1 - UPF0548 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCGGTGACTCAGATGCACGCCAATACAACAACGCGCAAAGCATGTT
Internal bar code:ATCATCTGACCAAGAGCGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAGGGAAGACCAGGGAG
Suggested primer 2:CTAGCACCGCAATTCATGGC