Insertion junction: CLIP2.005548_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005548
Chromosome:chromosome 2
Location:6238264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387050 FRK1 (1 of 1) 2.7.1.45 - 2-dehydro-3-deoxygluconokinase / KDG kinase; Putative fructokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTACAATCGGAGGCGGGCATGAGGTCCAGAGATGCGCGGAGGTGTT
Internal bar code:GTCGTTGCGCCATTCCCAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1117
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGAGCAAATCGACGTA
Suggested primer 2:AGCATGGTGAAGAGGTTGGG