Insertion junction: CLIP2.005549_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005549
Chromosome:chromosome 16
Location:257614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694400 TGD2,CGL57 Trigalactosyldiacylglycerol 2; (1 of 2) PF02470 - MlaD protein (MlaD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGACTAGGTGCGAACTGTGTGAATGTGTGTGTGTTGCGTGTTTGTG
Internal bar code:CGTTTAATGAGCCGAGCCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAAGCCCGCCAAATTG
Suggested primer 2:CACGGCTGAACCACTTGTTG