Insertion junction: CLIP2.005560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005560
Chromosome:chromosome 13
Location:1701259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574200 PAP2 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCATGTTGTTGGCGCGCACAGATGCCAGAGGATGACCTGTTGGTCGG
Internal bar code:TGGGTTTCGTAAACCAGTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4892
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CACATACTGCAGCCGAATGC
Suggested primer 2:CGCTGCTTTCATTCTCGCTC