Insertion junction: CLIP2.005561_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005561
Chromosome:chromosome 12
Location:3583233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496150 (1 of 1) PTHR20953//PTHR20953:SF4 - KINASE-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACCCTAACTGCCGCCGACGCACGTGCAGGAAGCTGGTCGCGCTCAC
Internal bar code:CTGTATTTGAGGGCGGTCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCTTGTTCGCGGAGAT
Suggested primer 2:GGTGAATTCTGGGCTGTCGA