Insertion junction: CLIP2.005566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005566
Chromosome:chromosome 7
Location:334451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314450 SMM22,CGL33B (1 of 1) PTHR12176:SF19 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN; conserved methyltransferase of unknown function intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGAAAACACATGTGTTACTGCGTGTGAGCATGGTGGTGGACGCGGTG
Internal bar code:TTTGCTTTTCGTCTATACACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTACATGCAGTGAAGGG
Suggested primer 2:TGAGCAGCCGTGTTCAGATT