Insertion junction: CLIP2.005566_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005566
Chromosome:chromosome 17
Location:5272870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802108 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCACGCAAACGTCGAAGCGTTGTTCAGCAGGGCGAGCAGCTTCCGGGT
Internal bar code:ACTTTCCAATCCAGTCAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTGAACACCTCCGTCTC
Suggested primer 2:GCCACAAGCAGTAAACGCAA