Insertion junction: CLIP2.005567_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005567
Chromosome:chromosome 15
Location:300987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635100 (1 of 2) IPR000104//IPR010402 - Antifreeze protein, type I // CCT domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGCGCTTTTGATGAGGCGCCTGGCTTCGCGGTTAGGGTTGTTTGAA
Internal bar code:TTATATTCAGAGACGGCTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:2.08333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAAAGGGCCTCGAACAGC
Suggested primer 2:CATGATGCGCCCCTTTCATG