Insertion junction: CLIP2.005568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005568
Chromosome:chromosome 6
Location:8814435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATACGGAAACAGCTACTTATAGCTTGTAGAGCAGAACTTTGTGGCCA
Internal bar code:CGATTGATATAGACGTACAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATGGCGCGGTAAACCTC
Suggested primer 2:GTAACTTCCAAGCTGCGTGC