Insertion junction: CLIP2.005585_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005585
Chromosome:chromosome 12
Location:1998508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510850 CGL73 expressed protein Conserved in the Green Lineage; (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCAATCTTCGCGGCCGCCCCCTACTGCAGGCTGCTGGGCCTGGGCAA
Internal bar code:CGTCGCCCAGCGCTGACATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGACAGTACGGCGAATA
Suggested primer 2:TAGGTCACAGGTGCAACGAC