Insertion junction: CLIP2.005586_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005586
Chromosome:chromosome 10
Location:1941849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431850 PGM18 Phosphoglycerate mutase family protein; (1 of 1) PTHR23029//PTHR23029:SF49 - PHOSPHOGLYCERATE MUTASE // PHOSPHOHISTIDINE PHOSPHATASE SIXA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGGGGGCGGCAAGACGCTGACTAGTACCCCCGCTCAGAGCGGGGCAG
Internal bar code:GGATGCAGAGGAGGAGGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2924
LEAP-Seq percent confirming:91.0714
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTAATAGTGCGCGTCC
Suggested primer 2:TATGCACGTTGACCACTGCT