Insertion junction: CLIP2.005588_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005588
Chromosome:chromosome 10
Location:3899788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446500 CPO1,CPL24 (1 of 1) PTHR14241//PTHR14241:SF10 - INTERFERON-INDUCED PROTEIN 44 // VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188; Conserved in the Plant Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACGATGTCATTGCAGGCGTGTGTTGTACGAAGCTCACCATGATGCT
Internal bar code:TCCCCGTGGAACTACTTGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTGGGCCATCAATGAT
Suggested primer 2:ACTGTACCGGGACATTGCTG