Insertion junction: CLIP2.005588_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005588
Chromosome:chromosome 10
Location:3899796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446500 CPO1,CPL24 (1 of 1) PTHR14241//PTHR14241:SF10 - INTERFERON-INDUCED PROTEIN 44 // VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188; Conserved in the Plant Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACGACGCTCTTCCACGTAATGCCCTCCAGCCGCCACTCCACGCCCT
Internal bar code:TCATAGTCAAATCGAATAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:159

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTACCGGGACATTGCTG
Suggested primer 2:TGTGCTGGGCCATCAATGAT