Insertion junction: CLIP2.005596_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005596
Chromosome:chromosome 5
Location:3531194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACGGAGGCTGACTGCACACGTGCATGCAACCAGCCACCCATCTACA
Internal bar code:CAGCCTTGTAACTGGGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1366
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGCTTGCAACACCATG
Suggested primer 2:CTATGCACGATGTGTTGCCG