Insertion junction: CLIP2.005601_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005601
Chromosome:chromosome 7
Location:5818662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353500 CGLD5A ethylene response element DNA-binding domain containing protein; (1 of 1) PTHR31190:SF30 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGGCGTGGACGCTGACGAGTACGAGGAGCAGGTGGATGTGGAGGCGG
Internal bar code:GTGGGCGGGTCAATAGATTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3755
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCACACATGCACTTG
Suggested primer 2:GGAGATGGAGGCACAGGTTG