Insertion junction: CLIP2.005605_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005605
Chromosome:chromosome 1
Location:2595782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGACGTGAGCTGTGACGCAAGTGGCAATAATCCCCGGCCAAGGAGC
Internal bar code:TGGGGGCAAAAGGGTATATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCTTGTGGTGTTGGTTC
Suggested primer 2:GACATCTCTGCCAAGCTGGT